So I got Sun Meteorite(Phoebus,FS) Mars Meteorite(Mars,Strength), and Mercury Meteorite(Minerva,Intelligence) when clearing the First +NG dungeon(Advent Bay).

Then I got Moon Meteorite(Diana,SP), Star Meteorite(Vulcan,Constitution) and Hades Meteorite(Neptune,Resistance) when clearing the last(Valkyrie Falls).

So where are the Meteorites for Jupiter(HP), Mercury(Speed), and Venus(Luck) Stones?

Edit;
It seems that once you fulfill all bonus conditions for the five dungeons, you get the last three.